Overall information
FSDB ID PP1P0072 Type +1 frameshifting
Data PREDICTED Kingdom prokaryota
Definition Pseudoalteromonas haloplanktis TAC125 chromosome I, complete sequence. 3214944 bp DNA circular BCT 20-JAN-2006
Resource [1] predicted by FSFinder
Nucleic acid sequence NC_007481
Amino acid sequence
gene
531558..532656
/gene="prfB"
/locus_tag="PSHAa0517"
/db_xref="GeneID:3709876"
CDS Click for details
Graphical view

531577
TGATTAACCAAATCAAGGAAATTCGCGAACGTACTGAGTTGCTTC
GGGGG
TAC
CTTTGAC
Stop codons TGA (531577),
Signal
GGGGG (531622 - 531626)
Slippery sequence
CTTTGAC (531630 - 531636)
Model +1 prokaryote frameshift signal
FSFinder parameters

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(You can obtain the above result by running FSFinder with the sequence and parameter values. You may have to alternate frames to get the same result.)
Target gene prfB gene
Sequence type Full genome
Direction + strand
Signal
Match sequences

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nt
Signal
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