Overall information
FSDB ID PP1P0037 Type +1 frameshifting
Data PREDICTED Kingdom prokaryota
Definition Shigella flexneri 5 str. 8401, complete genome. 4574284 bp DNA circular BCT 28-JUL-2006
Resource [1] predicted by FSFinder
Nucleic acid sequence NC_008258
Amino acid sequence
gene
complement(3007703..3008801)
/gene="prfB"
/locus_tag="SFV_2939"
/note="frameshift; original product: peptide chain release
factor RF-2"
/pseudo
/db_xref="GeneID:4209170"
CDS Click for details
Graphical view

3008781
TAAATAATCGCATTCAGGACCTCACGGAACGCTCCGACGTTCTTA
GGGGG
TAT
CTTTGAC
Stop codons TAA (3008781),
Signal
GGGGG (3008736 - 3008732)
Slippery sequence
CTTTGAC (3008728 - 3008722)
Model +1 prokaryote frameshift signal
FSFinder parameters

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(You can obtain the above result by running FSFinder with the sequence and parameter values. You may have to alternate frames to get the same result.)
Target gene prfB gene
Sequence type Full genome
Direction - strand
Signal
Match sequences

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nt
Signal
Match sequences