Overall information
FSDB ID PP1P0032 Type +1 frameshifting
Data PREDICTED Kingdom prokaryota
Definition Chlorobium tepidum TLS section 179 of 194 of the complete genome. 10134 bp DNA linear BCT 01-JUL-2002
Resource [1] Baranov PV, Gesteland RF, Atkins JF. EMBO Rep. 2002 Apr;3(4):373-7. Epub 2002 Mar 15.
[2] Baranov PV, Gesteland RF, Atkins JF. Gene. 2002 Mar 20;286(2):187-201.
Nucleic acid sequence AE012958
Amino acid sequence
gene 
7370..8465
/gene="prfB"
/note="synonym: CT2091; this region contains an authentic
frame shift and is not the result of a sequencing
artifact; similar to GB:M38590 SP:P28353 PID:154276;
identified by sequence similarity; putative; peptide chain
release factor 2"
CDS Click for details
Graphical view

7416
TGAACCAGTTAC
GGGGG
TAT
CTTTAAC
Stop codons TGA (7416),
Signal
GGGGG (7428 - 7432)
Slippery sequence
CTTTAAC (7436 - 7442)
Model +1 prokaryote frameshift signal
FSFinder parameters

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(You can obtain the above result by running FSFinder with the sequence and parameter values. You may have to alternate frames to get the same result.)
Target gene prfB gene
Sequence type Patial genome
Direction + strand
Signal
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nt
Signal
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