Overall information
FSDB ID PP1P0026 Type +1 frameshifting
Data PREDICTED Kingdom prokaryota
Definition Xylella fastidiosa 9a5c, section 93 of 229 of the complete genome. 13352 bp DNA linear BCT 04-JUN-2004
Resource [1] Baranov PV, Gesteland RF, Atkins JF. EMBO Rep. 2002 Apr;3(4):373-7. Epub 2002 Mar 15.
[2] Baranov PV, Gesteland RF, Atkins JF. Gene. 2002 Mar 20;286(2):187-201.
Nucleic acid sequence AE003947
Amino acid sequence
gene
414..1430
/locus_tag="XF1111"
CDS Click for details
Graphical view

366
TGA
GGGGG
TAT
CTTTGAC
Stop codons TGA (366),
Signal
GGGGG (369 - 373)
Slippery sequence
CTTTGAC (377 - 383)
Model +1 prokaryote frameshift signal
FSFinder parameters

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(You can obtain the above result by running FSFinder with the sequence and parameter values. You may have to alternate frames to get the same result.)
Target gene prfB gene
Sequence type Patial genome
Direction + strand
Signal
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nt
Signal
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