Overall information
FSDB ID PP1P0025 Type +1 frameshifting
Data PREDICTED Kingdom prokaryota
Definition Xanthomonas campestris pv. campestris str. ATCC 33913, section 195 of 460 of the complete genome. 12903 bp DNA linear BCT 23-MAY-20
Resource [1] Baranov PV, Gesteland RF, Atkins JF. EMBO Rep. 2002 Apr;3(4):373-7. Epub 2002 Mar 15.
[2] Baranov PV, Gesteland RF, Atkins JF. Gene. 2002 Mar 20;286(2):187-201.
Nucleic acid sequence AE012287
Amino acid sequence
gene 
5142..6083
/gene="prfB"
/note="synonym: XCC1852"
CDS Click for details
Graphical view

4959
TGATCGAAACCAATCCGATCCGCCAGCGCATCACCGATCTCAACGATCGCGTGCTCTCGCTCA
GGGGG
TAT
CTTTGAC
Stop codons TGA (4959),
Signal
GGGGG (5022 - 5026)
Slippery sequence
CTTTGAC (5030 - 5036)
Model +1 prokaryote frameshift signal
FSFinder parameters

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(You can obtain the above result by running FSFinder with the sequence and parameter values. You may have to alternate frames to get the same result.)
Target gene prfB gene
Sequence type Patial genome
Direction + strand
Signal
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nt
Signal
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