| FSDB ID | PP1P0024 | Type | +1 frameshifting | ||
| Data | PREDICTED | Kingdom | prokaryota | ||
| Definition | Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, section 60 of 251 of the complete chromosome. 10279 bp DNA linear BCT 10-OCT-2003 | ||||
| Resource |
[1]
Baranov PV, Gesteland RF, Atkins JF. EMBO Rep. 2002 Apr;3(4):373-7. Epub 2002 Mar 15. [2] Baranov PV, Gesteland RF, Atkins JF. Gene. 2002 Mar 20;286(2):187-201. |
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| Nucleic acid sequence | AE004152 | ||||
| Amino acid sequence | |||||
| gene |
5857..6821 /gene="VC0663" /note="This region contains an authentic frame shift and is not the result of a sequencing artifact; similar to GB:M38590 SP:P28353 PID:154276; identified by sequence similarity; putative;peptide chain release factor 2, authentic frameshift" |
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| Graphical view | |||||||||||||
 
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| Model | +1 prokaryote frameshift signal | |||||||
| FSFinder parameters
Run FSFinder (You can obtain the above result by running FSFinder with the sequence and parameter values. You may have to alternate frames to get the same result.) |
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| Target gene | prfB gene | |||||||
| Sequence type | Patial genome | |||||||
| Direction | + strand | |||||||
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