| FSDB ID | PP1P0017 | Type | +1 frameshifting | ||
| Data | PREDICTED | Kingdom | prokaryota | ||
| Definition | Shewanella oneidensis MR-1 section 92 of 457 of the complete genome. 12755 bp DNA linear BCT 02-DEC-2002 | ||||
| Resource |
[1]
Baranov PV, Gesteland RF, Atkins JF. EMBO Rep. 2002 Apr;3(4):373-7. Epub 2002 Mar 15. [2] Baranov PV, Gesteland RF, Atkins JF. Gene. 2002 Mar 20;286(2):187-201. |
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| Nucleic acid sequence | AE015543 | ||||
| Amino acid sequence | |||||
| gene |
9444..10542 /gene="prfB" /locus_tag="SO0991" /note="This region contains an authentic frame shift and is not the result of a sequencing artifact; peptide chain release factor 2, programmed frameshift; similar to SP:P06691, GB:Z00027, PID:154905, and PID:581275; identified by sequence similarity; putative" |
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| Graphical view | |||||||||||||
 
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| Model | +1 prokaryote frameshift signal | |||||||
| FSFinder parameters
Run FSFinder (You can obtain the above result by running FSFinder with the sequence and parameter values. You may have to alternate frames to get the same result.) |
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| Target gene | prfB gene | |||||||
| Sequence type | Patial genome | |||||||
| Direction | + strand | |||||||
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