Overall information
FSDB ID PP1P0001 Type +1 frameshifting
Data PREDICTED Kingdom prokaryota
Definition Haemophilus ducreyi strain 35000HP section 2 of 6 of the complete genome. 301191 bp DNA linear BCT 15-AUG-2003
Resource [1] Baranov PV, Gesteland RF, Atkins JF. EMBO Rep. 2002 Apr;3(4):373-7. Epub 2002 Mar 15.
[2] Baranov PV, Gesteland RF, Atkins JF. Gene. 2002 Mar 20;286(2):187-201.
Nucleic acid sequence AE017152
Amino acid sequence
gene
complement(140156..141211)
/gene="prfB"
/locus_tag="HD0575"
CDS Click for details
Graphical view

159978
TAACTGAGCGTACACAGCTCATTC
GGGGG
TAT
CTTTGAC
Stop codons TAA (159978),
Signal
GGGGG (160002 - 160006)
Slippery sequence
CTTTGAC (160010 - 160016)
Model +1 prokaryote frameshift signal
FSFinder parameters

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(You can obtain the above result by running FSFinder with the sequence and parameter values. You may have to alternate frames to get the same result.)
Target gene prfB gene
Sequence type Patial genome
Direction + strand
Signal
Match sequences

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nt
Signal
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