Overall information
FSDB ID PP1E0006 Type +1 frameshifting
Data PREDICTED Kingdom eukaryota
Definition Mesocricetus auratus ornithine decarboxylase antizyme (ODC-Az) mRNA, complete cds. 1044 bp mRNA linear ROD 04-SEP-1996
Resource [1] Tsuji T, Todd R, Meyer C, McBride J, Liao PH, Huang MF, Chou MY, Donoff RB, Wong DT. Oncogene. 1998 Jul 2;16(26):3379-85.
Nucleic acid sequence U58672
Amino acid sequence
gene 
1..1044
/gene="ODC-Az"
CDS Click for details
Graphical view

78
TGAAATCCTCCCTGCAGCGGATCCTCAACAGCCACTGCTTCGCCAGAGAGAAGGAAGGGGACAAACGCAGCGCCACGCTCCACGCCAGCCGCACCATGCCGCTCCTCAGTCAGCACAGCCGCGGCGGCTGCAGCAGCGAGAGTTCTAGGGCCGCCCTCCATTGCTGTAGTAACCTGGGTCCGGGGCCTCGGTGGTGC
TCCTGA
TGTC
CCTCACCCACCCCTGAAGATCCCAGGTGGGCGAGGGAACAGTCAGCGGGATC
Stop codons TGA (78),
Slippery sequence
TCCTGA (275 - 280)
Spacer TGTC (4 nt)
Stimulatory structure
CCTCACCCACCCCTGAAGATCCCAGGTGGGCGAGGGAACAGTCAGCGGGATC (285 - 336)
PREDICTED STRUCTURE

Predicted by pknotsRG with the minimum energy option
Visualized by PseudoViewer
Model +1 eukaryote frameshift signal
FSFinder parameters

Run FSFinder
(You can obtain the above result by running FSFinder with the sequence and parameter values. You may have to alternate frames to get the same result.)
Target gene oaz gene
Sequence type Patial genome
Direction + strand
Signal
Match sequences

spacer

nt
RNA structure
Stem
Pseudoknot
- Stem1 <
- Stem2<
- Loop1<
- Loop2 <
- Loop3<