Overall information
FSDB ID PP1E0005 Type +1 frameshifting
Data PREDICTED Kingdom eukaryota
Definition Gallus gallus ornithine decarboxylase antizyme mRNA, complete cds. 1020 bp mRNA linear VRT 22-DEC-1998
Resource [1] Drozdowski B, Gong TW, Lomax MI. Biochim Biophys Acta. 1998 Mar 4;1396(1):21-6.
[2] Ivanov IP, Matsufuji S, Murakami Y, Gesteland RF, Atkins JF. EMBO J. 2000 Apr 17;19(8):1907-17.
Nucleic acid sequence AF007806
Amino acid sequence
gene 
oaz
CDS Click for details
Graphical view

138
TGAGCCTCAGTACCGGACAGAGCAGTTCCAGGGTTCCCTTCAATTGCTGTAGTAACCTGGGTCCGGGGCCTCGGTGGTGC
TCCTGA
TGTC
CCTCACCCACCCCTGAAGATCCCAGGTGGGCGAGGGAATAGTCAGAGGGATC
Stop codons TGA (138),
Slippery sequence
TCCTGA (218 - 223)
Spacer TGTC (4 nt)
Stimulatory structure
CCTCACCCACCCCTGAAGATCCCAGGTGGGCGAGGGAATAGTCAGAGGGATC (228 - 279)
PREDICTED STRUCTURE

Predicted by pknotsRG with the minimum energy option
Visualized by PseudoViewer
Model +1 eukaryote frameshift signal
FSFinder parameters

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(You can obtain the above result by running FSFinder with the sequence and parameter values. You may have to alternate frames to get the same result.)
Target gene oaz gene
Sequence type Patial genome
Direction + strand
Signal
Match sequences

spacer

nt
RNA structure
Stem
Pseudoknot
- Stem1 <
- Stem2<
- Loop1<
- Loop2 <
- Loop3<