Overall information
FSDB ID PM1V0008 Type -1 frameshifting
Data PREDICTED Kingdom viruses
Definition Enterobacteria phage 186, complete genome. 30624 bp DNA linear PHG 07-APR-2006
Resource [1] Christie GE, Temple LM, Bartlett BA, Goodwin TS. J Bacteriol. 2002 Dec;184(23):6522-31.
Nucleic acid sequence NC_001317
Amino acid sequence
gene 
15960..16447
/gene="H"
/locus_tag="186p22"
/db_xref="GeneID:1262461"
CDS Click for details
CDS Click for details
Graphical view

16256
TAAGGTGATTGG
TTTTTTG
TCAC
CGGCTTCGGCGGAATAGACTTCCCGCCCGGCCTGTCGACCGATGACCTGATGGCGGATATCGCAGTGATATTCCACTGGCCGCC
Stop codons TAA (16256),
Slippery sequence
TTTTTTG (16268 - 16274)
Spacer TCAC (4 nt)
Stimulatory structure
CGGCTTCGGCGGAATAGACTTCCCGCCCGGCCTGTCGACCGATGACCTGATGGCGGATATCGCAGTGATATTCCACTGGCCGCC (16279 - 16362)
PREDICTED STRUCTURE

Predicted by pknotsRG with the minimum energy option
Visualized by PseudoViewer
Model -1 frameshift signal
FSFinder parameters

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(You can obtain the above result by running FSFinder with the sequence and parameter values. You may have to alternate frames to get the same result.)
Target gene genes in viruses
Sequence type Patial genome
Direction + strand
Pattern
Pattern
Match
Exceptions
spacer

nt
RNA structure
Stem
Pseudoknot
- Stem1 <
- Stem2<
- Loop1<
- Loop2 <
- Loop3<