Overall information
FSDB ID PM1P0002 Type -1 frameshifting
Data PREDICTED Kingdom prokaryota
Definition Salmonella enterica subsp. enterica serovar Typhi Ty2, section 9 of 16 of the complete genome. 300029 bp DNA linear BCT 21-MAR-2003
Resource [1] Baranov PV, Gesteland RF, Atkins JF. Gene. 2002 Mar 20;286(2):187-201.
Nucleic acid sequence AE016842
Amino acid sequence
gene
complement(41487..43415)
/gene="dnaX"
/locus_tag="t2376"
CDS Click for details
Graphical view

42311
TGAAACGCCGCGGCAGTCTTTTGCGCCCGTGGCCCCAACGGCGGTAATGACGCCGCCGCAGGTGCAGCAGCCGTCGGCGCCCGCGCCGCAGACATCGCCAGCGCCGCTGCCGGCGTCTACCAGTCAGGTGCTGGCGGCGCGCAATCAGCTACAGCGCGCGCAGGGAGTAACCAAAAC
AAAAAAG
Stop codons TGA (42311),
Slippery sequence
AAAAAAG (42134 - 42128)
Model -1 frameshift signal
FSFinder parameters

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(You can obtain the above result by running FSFinder with the sequence and parameter values. You may have to alternate frames to get the same result.)
Target gene dnaX gene
Sequence type Patial genome
Direction - strand
Pattern
Pattern
Match
Exceptions