Overall information
FSDB ID PM1E0004 Type -1 frameshifting
Data PREDICTED Kingdom eukaryota
Definition Homo sapiens mRNA for KIAA1051 protein, partial cds. 6188 bp mRNA linear PRI 31-JAN-2006
Resource [1] Shigemoto K, Brennan J, Walls E, Watson CJ, Stott D, Rigby PW, Reith AD. Nucleic Acids Res. 2001 Oct 1;29(19):4079-88.
Nucleic acid sequence AB028974
Amino acid sequence
gene 
KIAA 1051
CDS Click for details
CDS Click for details
Graphical view

967
TGACAATTGTCCTGCCAAGGCCTCAAAGTCTTCGCCGGC
GGGAAAC
TCCCC
GGCCCCGCTGTAGAGGGACCTTCAGCGACCGGGCCAGAAATAATAAGGTCCC
Stop codons TGA (967),
Slippery sequence
GGGAAAC (1006 - 1012)
Spacer TCCCC (5 nt)
Stimulatory structure
GGCCCCGCTGTAGAGGGACCTTCAGCGACCGGGCCAGAAATAATAAGGTCCC (1018 - 1069)
PREDICTED STRUCTURE

Predicted by pknotsRG with the minimum energy option
Visualized by PseudoViewer
Model -1 frameshift signal
FSFinder parameters

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(You can obtain the above result by running FSFinder with the sequence and parameter values. You may have to alternate frames to get the same result.)
Target gene genes in viruses
Sequence type Patial genome
Direction + strand
Pattern
Pattern
Match
Exceptions
spacer

nt
RNA structure
Stem
Pseudoknot
- Stem1 <
- Stem2<
- Loop1<
- Loop2 <
- Loop3<