Overall information
FSDB ID EP1E0005 Type +1 frameshifting
Data EXPERIMENTAL Kingdom eukaryota
Definition Homo sapiens ornithine decarboxylase antizyme 2 (OAZ2), mRNA. 1906 bp mRNA linear PRI 19-MAR-2006
Resource [1] Ivanov IP, Gesteland RF, Atkins JF. Genomics. 1998 Sep 1;52(2):119-29.
[2] Ivanov IP, Matsufuji S, Murakami Y, Gesteland RF, Atkins JF.
Nucleic acid sequence NM_002537
Amino acid sequence
gene 
/gene="OAZ2"
/note="5' transcription initiation; additional
transcription start sites are located downstream of this
one."
CDS Click for details
Graphical view

242
TGAGTAACTGTCCCCAGCTCCAGTGCTGCAGGCACATTGTTCCAGGGCCTCTGTGGTGC
TCCTGA
TGCC
CCTCACCCACTGTCGAAGATCCCCGGTGGGCGAGG
Stop codons TGA (242),
Slippery sequence
TCCTGA (301 - 306)
Spacer TGCC (4 nt)
Stimulatory structure
CCTCACCCACTGTCGAAGATCCCCGGTGGGCGAGG (311 - 345)
PREDICTED STRUCTURE

Predicted by pknotsRG with the minimum energy option
Visualized by PseudoViewer
Model +1 eukaryote frameshift signal
FSFinder parameters

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(You can obtain the above result by running FSFinder with the sequence and parameter values. You may have to alternate frames to get the same result.)
Target gene oaz gene
Sequence type Patial genome
Direction + strand
Signal
Match sequences

spacer

nt
RNA structure
Stem
Pseudoknot
- Stem1 <
- Stem2<
- Loop1<
- Loop2 <
- Loop3<