Overall information
FSDB ID EP1E0002 Type +1 frameshifting
Data EXPERIMENTAL Kingdom eukaryota
Definition Rattus norvegicus mRNA for ornithine decarboxylase antizyme, complete cds. 1020 bp mRNA linear ROD 07-JUN-2006
Resource [1] Rom E, Kahana C. Proc Natl Acad Sci U S A. 1994 Apr 26;91(9):3959-63. Erratum in: Proc Natl Acad Sci U S A 1994 Sep 13;91(19):9195.
[2] Matsufuji S, Matsufuji T, Miyazaki Y, Murakami Y, Atkins JF, Gesteland RF, Hayashi S. Cell. 1995 Jan 13;80(1):51-60.
Nucleic acid sequence D10706
Amino acid sequence
gene
oaz
CDS Click for details
Graphical view

56
TGAAATCCTCCCTGCAGCGGATCCTCAACAGCCACTGCTTCGCCAGAGAGAAAGAAGGGGACAAACGCAGCGCCACGCTTCACGCCAGCCGCACCATGCCGCTTCTTAGTCAGCACAGCCGCGGCGGCTGCAGCAGCGAGAGTTCTAGGGTTGCCCTTCATTGCTGTAGTAACCTGGGTCCGGGGCCTCGGTGGTGC
TCCTGA
TGTC
CCTCACCCACCCCTGAAGATCCCAGGTGGGCGAGGGAACAGTCAGCGGGATC
Stop codons TGA (56),
Slippery sequence
TCCTGA (253 - 258)
Spacer TGTC (4 nt)
Stimulatory structure
CCTCACCCACCCCTGAAGATCCCAGGTGGGCGAGGGAACAGTCAGCGGGATC (263 - 314)
PREDICTED STRUCTURE

Predicted by pknotsRG with the minimum energy option
Visualized by PseudoViewer
Model +1 eukaryote frameshift signal
FSFinder parameters

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Target gene oaz gene
Sequence type Patial genome
Direction + strand
Signal
Match sequences

spacer

nt
RNA structure
Stem
Pseudoknot
- Stem1 <
- Stem2<
- Loop1<
- Loop2 <
- Loop3<