Overall information
FSDB ID EM1V0021 Type -1 frameshifting
Data EXPERIMENTAL Kingdom viruses
Definition Enterobacteria phage P2, complete genome. 33593 bp DNA linear PHG 30-MAR-2006
Resource [1] Christie GE, Temple LM, Bartlett BA, Goodwin TS. J Bacteriol. 2002 Dec;184(23):6522-31.
Nucleic acid sequence NC_001895
Amino acid sequence
gene 
19430..19857
/gene="E+E'"
/locus_tag="P2p25"
/db_xref="GeneID:1261536"
CDS Click for details
Graphical view

19666
TAAGGTGGTCGG
TTTTTTG
TCGCCGAAC
TCGGTGCAGTGACGTTTCCGA
Stop codons TAA (19666),
Slippery sequence
TTTTTTG (19678 - 19684)
Spacer TCGCCGAAC (9 nt)
Stimulatory structure
TCGGTGCAGTGACGTTTCCGA (19694 - 19714)
PREDICTED STRUCTURE

Predicted by pknotsRG with the minimum energy option
Visualized by PseudoViewer
Model -1 frameshift signal
FSFinder parameters

Run FSFinder
(You can obtain the above result by running FSFinder with the sequence and parameter values. You may have to alternate frames to get the same result.)
Target gene oaz gene
Sequence type Patial genome
Direction + strand
Pattern
Pattern
Match
Exceptions
spacer

nt
RNA structure
Stem
Pseudoknot
- Stem1 <
- Stem2<
- Loop1<
- Loop2 <
- Loop3<