Overall information
FSDB ID EM1P0002 Type -1 frameshift
Data EXPERIMENTAL Kingdom prokaryota
Definition Salmonella typhimurium adenine phosphoribosyl-transferase (apt) gene, partial cds, and DNA polymerase III tau subunit (dnaX) and DNA polymerase III gamma subunit (dnaX) gene, complete cds. 2234 bp DNA linear BCT 22-DEC-1998
Resource [1] Blinkova A, Burkart MF, Owens TD, Walker JR. J Bacteriol. 1997 Jul;179(13):4438-42.
[2] Baranov PV, Gesteland RF, Atkins JF. Gene. 2002 Mar 20;286(2):187-201.
Nucleic acid sequence U66040
Amino acid sequence
gene 
101..2101
/gene="dnaX"
CDS Click for details
Graphical view

1276
TGAAACGCCGCGGCAGTCTTTTGCGCCCGTGGCCCCAACGGCGGTAATGACGCCGCCGCAGCTGCAGCAGCCGTCGGCGCCCGCGCCACAGACATCGCCAGCGCCGCTGCCGGCGTCTACCAGTCAGGTGCTGGCGGCGCGCAATCAGCTACAGCGCGCGCAGGGAGTAACCAAAAC
AAAAAAG
AGTGA
ACCGGCAGCCGCATCCCGCGCGCGGCCGGT
Stop codons TGA (1276),
Slippery sequence
AAAAAAG (1453 - 1459)
Spacer AGTGA (5 nt)
Stimulatory structure
ACCGGCAGCCGCATCCCGCGCGCGGCCGGT (1465 - 1494)

Referenced structure by Journal of Bacteriology (1997) 179, 4438-4442.
Visualized by PseudoViewer
Model -1 frameshift signal
FSFinder parameters

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Target gene dnaX gene
Sequence type Patial genome
Direction + strand
Pattern
Pattern
Match
Exceptions